Food-Microbiome Dataset

NCBI

Data Filtering

State:

Sub-Category:

Region:

BIOPROJECT SRR Protocol/ Seceencing Instrument State Sub Category Hypervariable Region DOI
PRJNA610749 SRR11277832 Illumina MiSeq West Bengal Kinema (fermented soyabean) V3-V4 https://doi.org/10.1016/j.foodres.2020.110055
PRJNA610749 SRR11277833 Illumina MiSeq West Bengal Kinema (fermented soyabean) V3-V4 https://doi.org/10.1016/j.foodres.2020.110055
PRJNA610749 SRR11277834 Illumina MiSeq West Bengal Kinema (fermented soyabean) V3-V4 https://doi.org/10.1016/j.foodres.2020.110055
PRJNA610749 SRR11277835 Illumina MiSeq West Bengal Kinema (fermented soyabean) V3-V4 https://doi.org/10.1016/j.foodres.2020.110055
PRJNA610749 SRR11277836 Illumina MiSeq Sikkim Kinema (fermented soyabean) V3-V4 https://doi.org/10.1016/j.foodres.2020.110055
PRJNA610749 SRR11277837 Illumina MiSeq Sikkim Kinema (fermented soyabean) V3-V4 https://doi.org/10.1016/j.foodres.2020.110055
PRJNA611486 SRR11277727 Illumina MiSeq West Bengal Kinema (fermented soyabean) ITS3-ITS4 https://doi.org/10.1016/j.foodres.2020.110055
PRJNA611486 SRR11277728 Illumina MiSeq West Bengal Kinema (fermented soyabean) ITS3-ITS4 https://doi.org/10.1016/j.foodres.2020.110055
PRJNA611486 SRR11277729 Illumina MiSeq Sikkim Kinema (fermented soyabean) ITS3-ITS4 https://doi.org/10.1016/j.foodres.2020.110055
PRJNA611486 SRR11277730 Illumina MiSeq Sikkim Kinema (fermented soyabean) ITS3-ITS4 https://doi.org/10.1016/j.foodres.2020.110055
PRJNA611486 SRR11277741 Illumina MiSeq West Bengal Kinema (fermented soyabean) ITS3-ITS4 https://doi.org/10.1016/j.foodres.2020.110055
PRJNA611486 SRR11277742 Illumina MiSeq West Bengal Kinema (fermented soyabean) ITS3-ITS4 https://doi.org/10.1016/j.foodres.2020.110055
PRJNA529966 SRR8830666 Illumina HiSeq 2500 Sikkim Kinema (fermented soyabean) Shotgun Sequencing https://doi.org/10.3389/fmicb.2019.01744
PRJNA529966 SRR8830667 Illumina HiSeq 2500 Sikkim Kinema (fermented soyabean) Shotgun Sequencing https://doi.org/10.3389/fmicb.2019.01744
PRJNA529966 SRR8830669 Illumina HiSeq 2500 Sikkim Kinema (fermented soyabean) Shotgun Sequencing https://doi.org/10.3389/fmicb.2019.01744
PRJNA600094 SRR10857170 Illumina MiSeq Sikkim Sidra (Fermented fish) V3-V4 https://doi.org/10.1016/j.foodres.2020.109885
PRJNA600094 SRR10857171 Illumina MiSeq Sikkim Sidra (Fermented fish) V3-V4 https://doi.org/10.1016/j.foodres.2020.109885
PRJNA600094 SRR10857172 Illumina MiSeq Sikkim Sidra (Fermented fish) V3-V4 https://doi.org/10.1016/j.foodres.2020.109885
PRJNA600094 SRR10857173 Illumina MiSeq Sikkim Sidra (Fermented fish) V3-V4 https://doi.org/10.1016/j.foodres.2020.109885
PRJNA600094 SRR10857174 Illumina MiSeq Sikkim Sidra (Fermented fish) V3-V4 https://doi.org/10.1016/j.foodres.2020.109885
PRJNA600094 SRR10857175 Illumina MiSeq Sikkim Sidra (Fermented fish) V3-V4 https://doi.org/10.1016/j.foodres.2020.109885
PRJNA600094 SRR10857176 Illumina MiSeq Sikkim Sidra (Fermented fish) V3-V4 https://doi.org/10.1016/j.foodres.2020.109885
PRJNA600094 SRR10857177 Illumina MiSeq Sikkim Sidra (Fermented fish) V3-V4 https://doi.org/10.1016/j.foodres.2020.109885
PRJNA600094 SRR10857178 Illumina MiSeq Sikkim Sidra (Fermented fish) V3-V4 https://doi.org/10.1016/j.foodres.2020.109885
PRJNA555473 SRR9714957 Illumina MiSeq Sikkim Pork kargyong (Meat product) V3-V4 https://doi.org/10.1016/j.foodres.2020.110002
PRJNA555473 SRR9714958 Illumina MiSeq Sikkim Beef kargyong (Meat product) V3-V4 https://doi.org/10.1016/j.foodres.2020.110002
PRJNA555473 SRR9714959 Illumina MiSeq Sikkim Khyopeh (Meat product) V3-V4 https://doi.org/10.1016/j.foodres.2020.110002
PRJNA555473 SRR9714960 Illumina MiSeq Sikkim Yak satchu (Meat product) V3-V4 https://doi.org/10.1016/j.foodres.2020.110002
PRJNA597963 SRR10822349 Illumina MiSeq Assam Xaj-pitha (Rice wine) Shotgun Sequencing https://doi.org/10.1007/s13205-020-2059-z
PRJNA474271 SRR7279859 Illumina MiSeq Tripura Chowan (Alcoholic beverages) ITS2 https://doi.org/10.3389/fmicb.2019.00348
PRJNA474271 SRR7279860 Illumina MiSeq Mizoram Dawdim (Alcoholic beverages) ITS2 https://doi.org/10.3389/fmicb.2019.00348
PRJNA474271 SRR7279861 Illumina MiSeq Nagaland Khekhrii (Alcoholic beverages) ITS2 https://doi.org/10.3389/fmicb.2019.00348
PRJNA474271 SRR7279862 Illumina MiSeq Assam Humao (Alcoholic beverages) ITS2 https://doi.org/10.3389/fmicb.2019.00348
PRJNA474271 SRR7279863 Illumina MiSeq Arunachal Pradesh Phut (Alcoholic beverages) ITS2 https://doi.org/10.3389/fmicb.2019.00348
PRJNA474271 SRR7279864 Illumina MiSeq Manipur Hamei (Alcoholic beverages) ITS2 https://doi.org/10.3389/fmicb.2019.00348
PRJNA376467 SRR5310946 Illumina MiSeq Sikkim Marcha (Alcoholic beverages) ITS1-ITS2 https://doi.org/10.1038/s41598-017-11609-y
PRJNA376467 SRR5310945 Illumina MiSeq Meghalaya Thiat (Alcoholic beverages) ITS1-ITS2 https://doi.org/10.1038/s41598-017-11609-y
PRJNA376467 SRR5279402 Illumina MiSeq Sikkim Marcha (Alcoholic beverages) V4 https://doi.org/10.1038/s41598-017-11609-y
PRJNA376467 SRR5279401 Illumina MiSeq Meghalaya Thiat (Alcoholic beverages) V4 https://doi.org/10.1038/s41598-017-11609-y
PRJNA529966 SRR8830668 Illumina HiSeq 2500 Sikkim Kinema (fermented soyabean) Shotgun Sequencing https://doi.org/10.3389/fmicb.2019.01744
PRJNA695113 SRR13573809 MinION Sikkim Kinema (fermented soyabean) Shotgun Sequencing https://doi.org/10.3389%2Ffmicb.2022.868383

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