Publication

TITLE First Author Journal Publication date DOI
Metagenomics revealing molecular profiling of community structure and metabolic pathways in natural hot springs of the Sikkim Himalaya Nitish Sharma BMC Microbiology 10 August 2020 https://doi.org/10.1186/s12866-020-01923-3
A comparative metagenomic study reveals microbial diversity and their role in the biogeochemical cycling of Pangong lake Rashmi Rathour Science of The Total Environment 20 August 2020 https://doi.org/10.1016/j.scitotenv.2020.139074
Metagenomic analysis exploring taxonomic and functional diversity of bacterial communities of a Himalayan urban fresh water lake Tawseef Ahmad PLoS One 25 March 2021 https://doi.org/10.1371/journal.pone.0248116
Arsenic rich Himalayan hot spring metagenomics reveal genetically novel predator–prey genotypes Naseer Sangwan Environmental Microbiology reports 7 May 2015 https://doi.org/10.1111/1758-2229.12297
Metagenomic insights into the fungal assemblages of the northwest Himalayan cold desert Puja Gupta Extremophiles Microbial Life Under Extreme Conditions 23 July 2020 https://doi.org/10.1007/s00792-020-01191-z
Bacterial diversity and functional metagenomics expounding the diversity of xenobiotics, stress, defense and CRISPR gene ontology providing eco-efficiency to Himalayan Hot Springs Ishfaq Nabi Najar Functional & Integrative Genomics 02 January 2020 https://doi.org/10.1007/s10142-019-00723-x
Comparative metagenomic analyses of a high-altitude Himalayan geothermal spring revealed temperature-constrained habitat-specific microbial community and metabolic dynamics Nitish Kumar Mahato Archives of Microbiology 25 January 2019 https://doi.org/10.1007/s00203-018-01616-6
Bacterial diversity of Drass, cold desert in Western Himalaya, and its comparison with Antarctic and Arctic Puja Gupta Archives of Microbiology 09 June 2015 https://doi.org/10.1007/s00203-015-1121-4
Bio-prospecting Bacterial Diversity of Hot Springs in Northern Himalayan Region of India for Laccases Vijaya Gupta Indian Journal of Microbiology 20 June 2017 https://doi.org/10.1007/s12088-017-0656-2
Molecular profiling of microbial community structure and their CAZymes via metagenomics, from Tsomgo lake in the Eastern Himalayas Aditi Rai Archives of Microbiology 04 April 2021 https://doi.org/10.1007/s00203-021-02278-7
Culture independent bacterial diversity of Changme Khang and Changme Khangpu glaciers of North Sikkim, India Mingma Thundu Sherpa Environmental Sustainability 17 June 2019 https://doi.org/10.1007/s42398-019-00067-z
First report on Bacterial Diversity of Potable Spring water of Indian Himalayan Region (PREPRINT) Ashish Kumar Singh BIORIXIV PREPRINT SERVER - https://doi.org/10.1101/320275
Bacterial and archeal community composition in hot springs from Indo-Burma region, North-east India Amrita Kumari Panda AMB Express 10 November 2016 https://doi.org/10.1186/s13568-016-0284-y
Microbiome divergence across four major Indian riverine water ecosystems impacted by anthropogenic contamination: A comparative metagenomic analysis (PREPRINT) Raj Kumar Regar RESEARCH SQUARE - https://doi.org/10.21203/rs.3.rs-107257/v1
Metavirome and its functional diversity analysis through microbiome study of the Sikkim Himalayan hot spring solfataric mud sediments SayakDas Current Research in Microbial Sciences September 2020 https://doi.org/10.1016/j.crmicr.2020.05.002
Prevalence of methanogens in the uncultured Sikkim hot spring solfataric mud archaeal microbiome Sayak Das Environmental Sustainability 23 October 2020 https://doi.org/10.1007/s42398-020-00133-x
Metagenome-assembled genomes recovered from the datasets of a high-altitude Himalayan hot spring Khirganga, Himachal Pradesh, India Shekhar Nagar Data in Brief December 2021 https://doi.org/10.1016/j.dib.2021.107551
Microbiome and ecology of a hot spring-microbialite system on the Trans-Himalayan Plateau Chayan Roy Scientific Reports 03 April 2020 https://doi.org/10.1038/s41598-020-62797-z
Microbial diversity and soil physiochemical characteristic of higher altitude Saurabh Kumar PLoS One March 15, 2019 https://doi.org/10.1371/journal.pone.0213844
Pea (Pisum sativum l.) Plant Shapes Its Rhizosphere Microbiome for Nutrient Uptake and Stress Amelioration in Acidic Soils of the North-East Region of India Diptaraj Chaudhari Frontiers in Microbiology 03 June 2020 https://doi.org/10.3389/fmicb.2020.00968
Next generation sequencing and microbiome's taxonomical characterization of frozen soil of north western Himalayas of Jammu and Kashmir, India Verruchi Gupta Electronic Journal of Biotechnology May 2020 https://doi.org/10.1016/j.ejbt.2020.03.003
Dominant bacterial phyla in caves and their predicted functional roles in C and N cycle Surajit De Manda BMC Microbiology 11 April 2017 https://doi.org/10.1186/s12866-017-1002-x
Fish gill microbiome from India’s largest Brahmaputra River—a trans-border biodiversity hotspot region Dipika Malakar Environmental Monitoring and Assessment 11 January 2021 https://doi.org/10.1007/s10661-021-08847-z
Bacterial community structure analysis of a hot spring soil by next generation sequencing of ribosomal RNA Nivedita Rawat Genomics September 2019 https://doi.org/10.1016/j.ygeno.2018.06.008
Bacterial and fungal communities and their predictive functional profiles in kinema, a naturally fermented soybean food of India, Nepal and Bhutan Pynhunlang Kharnaior Food Research International February 2021 https://doi.org/10.1016/j.foodres.2020.110055
Anthropogenic Activities Induce Depletion in Microbial Communities at Urban Sites of the River Ganges Kunal Jani Current Microbiology 07 September 2017 https://doi.org/10.1007/s00284-017-1352-5
Metagenomic Insights Into the Taxonomic and Functional Features of Kinema, a Traditional Fermented Soybean Product of Sikkim Himalaya Jitesh Kumar Frontiers in Microbiology 02 August 2019 https://doi.org/10.3389/fmicb.2019.01744
Contrasting rhizosphere bacterial communities of healthy and wilted Dalbergia sissoo Roxb. forests Samiksha Joshi Rhizosphere March 2021 https://doi.org/10.1016/j.rhisph.2020.100295
Temporal Variation of Culture Independent Bacterial Diversity Based on Amplicon Sequencing of the North Sikkim Hot Spring Solfataric Soil Sediments Sayak Das RESEARCH SQUARE (in review for INTERNATIONAL MICROBIOLOGY) - https://doi.org/10.21203/rs.3.rs-1002781/v1
High-throughput sequence analysis of bacterial communities and their predictive functionalities in traditionally preserved fish products of Sikkim, India Meera OngmuBhutia Food Research International May 2021 https://doi.org/10.1016/j.foodres.2020.109885
Metataxonomic profiling of bacterial communities and their predictive functional profiles in traditionally preserved meat products of Sikkim state in India Meera OngmuBhutia Food Research International February 2021 https://doi.org/10.1016/j.foodres.2020.110002
Assessment of microbial quality and health risks associated with traditional rice wine starter Xaj-pitha of Assam, India: a step towards defined and controlled fermentation Jyotshna Keot 3 Biotech 23 January 2020 https://doi.org/10.1007/s13205-020-2059-z
Bacterial Communities Associated with the Biofilms Formed in High-Altitude Brackish Water Pangong Tso Located in the Himalayan Plateau Diptaraj S. Chaudhari Current Microbiology 20 October 2020 https://doi.org/10.1007/s00284-020-02244-4
Distribution of antibiotic and metal resistance genes in two glaciers of North Sikkim, India Mingma Thundu Sherpa Ecotoxicology and Environmental Safety 15 October 2020 https://doi.org/10.1016/j.ecoenv.2020.111037
Microbial ecology of two hot springs of Sikkim: Predominate population and geochemistry Ishfaq NabiNajar Science of The Total Environment 1 October 2018 https://doi.org/10.1016/j.scitotenv.2018.05.037
Metagenomic Evaluation of Bacterial and Archaeal Diversity in the Geothermal Hot Springs of Manikaran, India Sonu Bhatia Microbiology Resource Announcements 19 February 2015 https://doi.org/10.1128/genomeA.01544-14
Taxonomic and functional analysis of proglacial water bodies of Triloknath glacier ecosystem from North-Western Himalayas Kiran Dindhoria Ecological Informatics September 202 https://doi.org/10.1016/j.ecoinf.2021.101365
Deep sequencing analysis of bacterial community structure of Soldhar hot spring, India A. Sharma Microbiology 16 February 2017 https://doi.org/10.1134/S0026261717010118
Analysis of bacterial diversity associated with polyketide synthase (PKS) gene in brackish metagenome of TsoKar Lake of Ladakh, India V.K. Gupta Journal of Environmental Biology 01 April 2020 http://doi.org/10.22438/jeb/41/4/MRN-1331
Exploration of Microbial Diversity of Himalayan Glacier Moraine Soil Using 16S Amplicon Sequencing and Phospholipid Fatty Acid Analysis Approaches Mingma Thundu Sherpa Current Microbiology 28 October 2020 https://doi.org/10.1007/s00284-020-02259-x
Metagenomic analysis of bacterial and archaeal assemblages in the soil-mousse surrounding a geothermal spring Sonu Bhatia Genomics Data September 2015 https://doi.org/10.1016/j.gdata.2015.05.016
Mycobiome Diversity in Traditionally Prepared Starters for Alcoholic Beverages in India by High-Throughput Sequencing Method Shankar Prasad Sha Frontiers in Microbiology (Food Microbiology) March 2019 https://doi.org/10.3389/fmicb.2019.00348
16S rRNA Gene Amplicon Data Set-Based Bacterial Diversity in a Water-Soil Sample from Pangong Tso Lake, a High-Altitude Grassland Lake of the Northwest Himalayas Garima Bisht Microbiology Resource Announcements 1 November 2018 https://doi.org/10.1128/MRA.01192-18
Gut microbiome of endangered Tor putitora (Ham.) as a reservoir of antibiotic resistance genes and pathogens associated with fish health Himani Khurana BMC Microbiology 12 August 2020 https://doi.org/10.1186/s12866-020-01911-7
Analysis of bacterial and fungal communities in Marcha and Thiat, traditionally prepared amylolytic starters of India Shankar Prasad Sha Scientific Reports 08 September 2017 https://doi.org/10.1038/s41598-017-11609-y
Edaphic factors override temperature in shaping soil bacterial diversity across an elevation-vegetation gradient in Himalaya Pamela Bhattacharya Applied Soil Ecology February 2022 https://doi.org/10.1016/j.apsoil.2021.104306
Metagenomics analysis reveals features unique to Indian distal gut microbiota Kamaldeep Kaur PLoS One April 8, 2020 https://doi.org/10.1371/journal.pone.0231197
Draft Genome Sequence of Hyperthermophilic, Halotolerant Parageobacillus toebii PW12, Isolated from the Tattapani Hot Spring, Northwest Himalayas Parul Sharma Microbiology Resource Announcements 24 January 2019 https://doi.org/10.1128/MRA.01163-18
Investigations on microbial diversity of Jakrem hot spring, Meghalaya, India using cultivation-independent approach Amrita KumariPanda Genomics Data June 2015 https://doi.org/10.1016/j.gdata.2015.04.016
Metagenomic-Metabolomic Mining of Kinema, a Naturally Fermented Soybean Food of the Eastern Himalayas Pynhunlang Kharnaior Frontiers in Microbiology 29 April 2022 https://doi.org/10.3389/fmicb.2022.868383
Shifts in Bacterial Community Composition and Functional Traits at Different Time Periods Post-deglaciation of Gangotri Glacier, Himalaya Pamela Bhattacharya Current Microbiology 07 February 2022 https://doi.org/10.1007/s00284-022-02779-8
Change in dissolved oxygen of water bodies is the major driver of alteration in intestinal bacterial community of the bottom-feeding fishCirrhinusmrigala Chandana Basak RESEARCH SQUARE - https://doi.org/10.21203/rs.3.rs-1565774/v1
Quality assessment, safety evaluation, and microbiome analysis of night-soil compost from Lahaul valley of northwestern Himalaya Shruti SinaiBorker Waste Management 15 July 2022 https://doi.org/10.1016/j.wasman.2022.06.003

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