Hotspring Dataset

NCBI

Data Filtering

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BIOPROJECT SRR Protocol/ Seceencing Instrument State Sub Category Hypervariable Region DOI
PRJNA563887 SRR10067286 Illumina HiSeq 2500 Sikkim Water Shotgun Sequencing https://doi.org/10.1186/s12866-020-01923-3
PRJNA563887 SRR10067287 Illumina HiSeq 2500 Sikkim Water Shotgun Sequencing https://doi.org/10.1186/s12866-020-01923-3
PRJEB4614 ERR342783 Illumina Genome Analyzer IIx Himachal Pradesh Microbial Mats Shotgun Sequencing https://doi.org/10.1111/1758-2229.12297
PRJEB4614 ERR342782 Illumina Genome Analyzer IIx Himachal Pradesh Microbial Mats Shotgun Sequencing https://doi.org/10.1111/1758-2229.12297
PRJNA450505 SRR7015755 Illumina HiSeq 4000 Sikkim Water V3-V4 https://doi.org/10.1007/s10142-019-00723-x
PRJNA450510 SRR7015754 Illumina HiSeq 4000 Sikkim Water V3-V4 https://doi.org/10.1007/s10142-019-00723-x
PRJEB19501 ERR1846295 Illumina Genome Analyzer II Himachal Pradesh Water Shotgun Sequencing https://doi.org/10.1007/s00203-018-01616-6
PRJEB19501 ERR1846294 Illumina Genome Analyzer II Himachal Pradesh Water Shotgun Sequencing https://doi.org/10.1007/s00203-018-01616-6
PRJNA280383 SRR1997903 454 GS FLX Titanium Ladakh Soil V1-V3 https://doi.org/10.1007/s12088-017-0656-2
PRJNA283407 SRR2014930 Illumina MiSeq Sikkim Microbial Mats V4 https://doi.org/10.1186/s13568-016-0284-y
PRJNA283403 SRR2014862 Illumina MiSeq Sikkim Microbial Mats V4 https://doi.org/10.1186/s13568-016-0284-y
PRJNA485728 SRR7698540 Illumina HiSeq 4000 Sikkim Soil Amplicon-Based https://doi.org/10.1016/j.crmicr.2020.05.002
PRJNA485701 SRR7698584 Illumina HiSeq 4000 Sikkim Soil Amplicon-Based https://doi.org/10.1016/j.crmicr.2020.05.002
PRJNA673998 SRR13099685 Illumina HiSeq 2500 Himachal Pradesh Water Shotgun Sequencing https://doi.org/10.1016/j.dib.2021.107551
PRJNA673998 SRR13099686 Illumina HiSeq 2500 Himachal Pradesh Water Shotgun Sequencing https://doi.org/10.1016/j.dib.2021.107551
PRJNA673998 SRR13099687 Illumina HiSeq 2500 Himachal Pradesh Water Shotgun Sequencing https://doi.org/10.1016/j.dib.2021.107551
PRJNA673998 SRR13099688 Illumina HiSeq 2500 Himachal Pradesh Water Shotgun Sequencing https://doi.org/10.1016/j.dib.2021.107551
PRJNA673998 SRR13099689 Illumina HiSeq 2500 Himachal Pradesh Water Shotgun Sequencing https://doi.org/10.1016/j.dib.2021.107551
PRJNA673998 SRR13099690 Illumina HiSeq 2500 Himachal Pradesh Water Shotgun Sequencing https://doi.org/10.1016/j.dib.2021.107551
PRJNA673998 SRR13099691 Illumina HiSeq 2500 Himachal Pradesh Water Shotgun Sequencing https://doi.org/10.1016/j.dib.2021.107551
PRJNA673998 SRR13099692 Illumina HiSeq 2500 Himachal Pradesh Water Shotgun Sequencing https://doi.org/10.1016/j.dib.2021.107551
PRJNA673998 SRR13099693 Illumina HiSeq 2500 Himachal Pradesh Water Shotgun Sequencing https://doi.org/10.1016/j.dib.2021.107551
PRJNA673998 SRR13099694 Illumina HiSeq 2500 Himachal Pradesh Water Shotgun Sequencing https://doi.org/10.1016/j.dib.2021.107551
PRJNA673998 SRR13099695 Illumina HiSeq 2500 Himachal Pradesh Water Shotgun Sequencing https://doi.org/10.1016/j.dib.2021.107551
PRJNA673998 SRR12997673 Illumina HiSeq 2500 Himachal Pradesh Water Shotgun Sequencing https://doi.org/10.1016/j.dib.2021.107551
PRJNA673998 SRR12997672 Illumina HiSeq 2500 Himachal Pradesh Water Shotgun Sequencing https://doi.org/10.1016/j.dib.2021.107551
PRJNA673998 SRR12989705 Illumina HiSeq 2500 Himachal Pradesh Water Shotgun Sequencing https://doi.org/10.1016/j.dib.2021.107551
PRJNA673998 SRR12977061 Illumina HiSeq 2500 Himachal Pradesh Water Shotgun Sequencing https://doi.org/10.1016/j.dib.2021.107551
PRJNA673998 SRR12976788 Illumina HiSeq 2500 Himachal Pradesh Water Shotgun Sequencing https://doi.org/10.1016/j.dib.2021.107551
PRJNA673998 SRR12969846 Illumina HiSeq 2500 Himachal Pradesh Water Shotgun Sequencing https://doi.org/10.1016/j.dib.2021.107551
PRJNA296849 SRR5482169 Ion Torrent Proton Ladakh Water V3 https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR5482168 Ion Torrent Proton Ladakh Water V3 https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR5482167 Ion Torrent Proton Ladakh Water V3 https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR5482166 Ion Torrent Proton Ladakh Water V3 https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR5482165 Ion Torrent Proton Ladakh Water V3 https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR5482164 Ion Torrent Proton Ladakh Water V3 https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR5482163 Ion Torrent Proton Ladakh Water V3 https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR5482162 Ion Torrent Proton Ladakh Water V3 https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR5482161 Ion Torrent PGM Ladakh Water V3 https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR5482160 Ion Torrent PGM Ladakh Water V3 https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR5482159 Ion Torrent PGM Ladakh Water V3 https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR5482158 Ion Torrent PGM Ladakh Water V3 https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR5482156 Ion Torrent PGM Ladakh Water V3 https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR5482155 Ion Torrent PGM Ladakh Water V3 https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR5482154 Ion Torrent PGM Ladakh Water V3 https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR5482141 Ion Torrent PGM Ladakh Water V3 https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2904996 Ion Torrent PGM Ladakh Microbial Mats V3 https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2904995 Ion Torrent PGM Ladakh Microbial Mats V3 https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2626428 Ion Torrent PGM Ladakh Microbial Mats Shotgun Sequencing https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2626309 Ion Torrent PGM Ladakh Microbial Mats Shotgun Sequencing https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2626185 Ion Torrent PGM Ladakh Microbial Mats Shotgun Sequencing https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2626164 Ion Torrent PGM Ladakh Microbial Mats Shotgun Sequencing https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2626160 Ion Torrent PGM Ladakh Microbial Mats Shotgun Sequencing https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2626159 Ion Torrent PGM Ladakh Microbial Mats Shotgun Sequencing https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2626157 Ion Torrent PGM Ladakh Microbial Mats Shotgun Sequencing https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2626156 Ion Torrent PGM Ladakh Microbial Mats Shotgun Sequencing https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2626152 Ion Torrent PGM Ladakh Microbial Mats Shotgun Sequencing https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2626012 Ion Torrent PGM Ladakh Microbial Mats Shotgun Sequencing https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2625867 Ion Torrent PGM Ladakh Microbial Mats Shotgun Sequencing https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2625866 Ion Torrent PGM Ladakh Microbial Mats Shotgun Sequencing https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2625865 Ion Torrent PGM Ladakh Microbial Mats Shotgun Sequencing https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2625864 Ion Torrent PGM Ladakh Microbial Mats Shotgun Sequencing https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2625863 Ion Torrent PGM Ladakh Microbial Mats Shotgun Sequencing https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2625862 Ion Torrent PGM Ladakh Microbial Mats Shotgun Sequencing https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2625861 Ion Torrent PGM Ladakh Microbial Mats Shotgun Sequencing https://doi.org/10.1038/s41598-020-62797-z
PRJNA381679 SRR5416276 Illumina HiSeq 2500 Uttarakhand Soil V3-V4 https://doi.org/10.1016/j.ygeno.2018.06.008
PRJNA657139 SRR12454507 Illumina MiSeq Sikkim Soil V3-V4 https://doi.org/10.21203/rs.3.rs-1002781/v1
PRJNA657122 SRR12454511 Illumina MiSeq Sikkim Soil V3-V4 https://doi.org/10.21203/rs.3.rs-1002781/v1
PRJNA657152 SRR13643292 Illumina MiSeq Sikkim Soil V3-V4 https://doi.org/10.21203/rs.3.rs-1002781/v1
PRJNA657147 SRR12454506 Illumina MiSeq Sikkim Soil V3-V4 https://doi.org/10.21203/rs.3.rs-1002781/v1
PRJNA657133 SRR12454508 Illumina MiSeq Sikkim Soil V3-V4 https://doi.org/10.21203/rs.3.rs-1002781/v1
PRJNA657154 SRR12454505 Illumina MiSeq Sikkim Soil V3-V4 https://doi.org/10.21203/rs.3.rs-1002781/v1
PRJNA418908 SRR6302636 Illumina HiSeq 4000 Sikkim Water V3-V4 https://doi.org/10.1016/j.scitotenv.2018.05.037
PRJNA418905 SRR6303070 Illumina HiSeq 4000 Sikkim Water V3-V4 https://doi.org/10.1016/j.scitotenv.2018.05.037
PRJNA269061 SRR1696976 Illumina HiSeq 2000 Himachal Pradesh Water V4 https://doi.org/10.1128/genomeA.01544-14
PRJNA269061 SRR1696977 Illumina HiSeq 2000 Himachal Pradesh Water V4 https://doi.org/10.1128/genomeA.01544-14
PRJNA269061 SRR1696978 Illumina HiSeq 2000 Himachal Pradesh Water V4 https://doi.org/10.1128/genomeA.01544-14
PRJNA269061 SRR1696979 Illumina HiSeq 2000 Himachal Pradesh Water V4 https://doi.org/10.1128/genomeA.01544-14
PRJNA269061 SRR1696980 Illumina HiSeq 2000 Himachal Pradesh Water V4 https://doi.org/10.1128/genomeA.01544-14
PRJNA269061 SRR1696981 Illumina HiSeq 2000 Himachal Pradesh Soil V4 https://doi.org/10.1016/j.gdata.2015.05.016
PRJNA269061 SRR1696982 Illumina HiSeq 2000 Himachal Pradesh Soil V4 https://doi.org/10.1016/j.gdata.2015.05.016
PRJNA269061 SRR1696983 Illumina HiSeq 2000 Himachal Pradesh Soil V4 https://doi.org/10.1016/j.gdata.2015.05.016
PRJNA269061 SRR1696984 Illumina HiSeq 2000 Himachal Pradesh Soil V4 https://doi.org/10.1016/j.gdata.2015.05.016
PRJNA316363 SRR3292322 Ion Torrent PGM Himachal Pradesh Soil V3 https://doi.org/10.1134/S0026261717010118
PRJEB14856 ERR1543536 Illumina HiSeq 3000 Himachal Pradesh Microbial Mats Shotgun Sequencing Not yet reported
PRJNA484024 SRR8352206 NextSeq 500 Himachal Pradesh Water Shotgun Sequencing https://doi.org/10.1128/MRA.01163-18
PRJNA280364 SRR5387534 Illumina MiSeq Meghalaya Microbial Mats Shotgun Sequencing https://doi.org/10.1016/j.gdata.2015.04.016
PRJNA280364 SRR1953028 Illumina MiSeq Meghalaya Microbial Mats V3 https://doi.org/10.1016/j.gdata.2015.04.017

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