Shotgun Datasets

NCBI

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BIOPROJECT SRR Protocol/ Sequencing Instrument Category Sub Category State DOI
PRJNA563887 SRR10067286 Illumina HiSeq 2500 Hotspring Water Sikkim https://doi.org/10.1186/s12866-020-01923-3
PRJNA563887 SRR10067287 Illumina HiSeq 2500 Hotspring Water Sikkim https://doi.org/10.1186/s12866-020-01923-3
PRJNA388130 SRR5613218 NextSeq 500 Environmental Soil Ladakh https://doi.org/10.1016/j.scitotenv.2020.139074
PRJEB4614 ERR342783 Illumina Genome Analyzer IIx Hotspring Microbial Mats Himachal Pradesh https://doi.org/10.1111/1758-2229.12297
PRJEB4614 ERR342782 Illumina Genome Analyzer IIx Hotspring Microbial Mats Himachal Pradesh https://doi.org/10.1111/1758-2229.12297
PRJEB19501 ERR1846295 Illumina Genome Analyzer II Hotspring Water Himachal Pradesh https://doi.org/10.1007/s00203-018-01616-6
PRJEB19501 ERR1846294 Illumina Genome Analyzer II Hotspring Water Himachal Pradesh https://doi.org/10.1007/s00203-018-01616-6
PRJNA493696 SRR7939967 Illumina HiSeq 2500 Environmental Water Sikkim https://doi.org/10.1007/s00203-021-02278-7
PRJNA493696 SRR7939968 Illumina HiSeq 2500 Environmental Soil Sikkim https://doi.org/10.1007/s00203-021-02278-7
PRJNA438930 SRR6869415 HiSeq X Ten Glacier Ice Sikkim https://doi.org/10.1007/s42398-019-00067-z
PRJNA647427 SRR12274736 Illumina HiSeq 2500 Environmental Water Uttarakhand https://doi.org/10.21203/rs.3.rs-107257/v1
PRJNA647427 SRR12274737 Illumina HiSeq 2500 Environmental Water Uttarakhand https://doi.org/10.21203/rs.3.rs-107257/v1
PRJNA647427 SRR12274738 Illumina HiSeq 2500 Environmental Water Uttarakhand https://doi.org/10.21203/rs.3.rs-107257/v1
PRJNA647427 SRR12274739 Illumina HiSeq 2500 Environmental Water Uttarakhand https://doi.org/10.21203/rs.3.rs-107257/v1
PRJNA647427 SRR12274740 Illumina HiSeq 2500 Environmental Water Uttarakhand https://doi.org/10.21203/rs.3.rs-107257/v1
PRJNA673998 SRR13099685 Illumina HiSeq 2500 Hotspring Water Himachal Pradesh https://doi.org/10.1016/j.dib.2021.107551
PRJNA673998 SRR13099686 Illumina HiSeq 2500 Hotspring Water Himachal Pradesh https://doi.org/10.1016/j.dib.2021.107551
PRJNA673998 SRR13099687 Illumina HiSeq 2500 Hotspring Water Himachal Pradesh https://doi.org/10.1016/j.dib.2021.107551
PRJNA673998 SRR13099688 Illumina HiSeq 2500 Hotspring Water Himachal Pradesh https://doi.org/10.1016/j.dib.2021.107551
PRJNA673998 SRR13099689 Illumina HiSeq 2500 Hotspring Water Himachal Pradesh https://doi.org/10.1016/j.dib.2021.107551
PRJNA673998 SRR13099690 Illumina HiSeq 2500 Hotspring Water Himachal Pradesh https://doi.org/10.1016/j.dib.2021.107551
PRJNA673998 SRR13099691 Illumina HiSeq 2500 Hotspring Water Himachal Pradesh https://doi.org/10.1016/j.dib.2021.107551
PRJNA673998 SRR13099692 Illumina HiSeq 2500 Hotspring Water Himachal Pradesh https://doi.org/10.1016/j.dib.2021.107551
PRJNA673998 SRR13099693 Illumina HiSeq 2500 Hotspring Water Himachal Pradesh https://doi.org/10.1016/j.dib.2021.107551
PRJNA673998 SRR13099694 Illumina HiSeq 2500 Hotspring Water Himachal Pradesh https://doi.org/10.1016/j.dib.2021.107551
PRJNA673998 SRR13099695 Illumina HiSeq 2500 Hotspring Water Himachal Pradesh https://doi.org/10.1016/j.dib.2021.107551
PRJNA673998 SRR12997673 Illumina HiSeq 2500 Hotspring Water Himachal Pradesh https://doi.org/10.1016/j.dib.2021.107551
PRJNA673998 SRR12997672 Illumina HiSeq 2500 Hotspring Water Himachal Pradesh https://doi.org/10.1016/j.dib.2021.107551
PRJNA673998 SRR12989705 Illumina HiSeq 2500 Hotspring Water Himachal Pradesh https://doi.org/10.1016/j.dib.2021.107551
PRJNA673998 SRR12977061 Illumina HiSeq 2500 Hotspring Water Himachal Pradesh https://doi.org/10.1016/j.dib.2021.107551
PRJNA673998 SRR12976788 Illumina HiSeq 2500 Hotspring Water Himachal Pradesh https://doi.org/10.1016/j.dib.2021.107551
PRJNA673998 SRR12969846 Illumina HiSeq 2500 Hotspring Water Himachal Pradesh https://doi.org/10.1016/j.dib.2021.107551
PRJNA296849 SRR2626428 Ion Torrent PGM Hotspring Microbial Mats Ladakh https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2626309 Ion Torrent PGM Hotspring Microbial Mats Ladakh https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2626185 Ion Torrent PGM Hotspring Microbial Mats Ladakh https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2626164 Ion Torrent PGM Hotspring Microbial Mats Ladakh https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2626160 Ion Torrent PGM Hotspring Microbial Mats Ladakh https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2626159 Ion Torrent PGM Hotspring Microbial Mats Ladakh https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2626157 Ion Torrent PGM Hotspring Microbial Mats Ladakh https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2626156 Ion Torrent PGM Hotspring Microbial Mats Ladakh https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2626152 Ion Torrent PGM Hotspring Microbial Mats Ladakh https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2626012 Ion Torrent PGM Hotspring Microbial Mats Ladakh https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2625867 Ion Torrent PGM Hotspring Microbial Mats Ladakh https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2625866 Ion Torrent PGM Hotspring Microbial Mats Ladakh https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2625865 Ion Torrent PGM Hotspring Microbial Mats Ladakh https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2625864 Ion Torrent PGM Hotspring Microbial Mats Ladakh https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2625863 Ion Torrent PGM Hotspring Microbial Mats Ladakh https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2625862 Ion Torrent PGM Hotspring Microbial Mats Ladakh https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2625861 Ion Torrent PGM Hotspring Microbial Mats Ladakh https://doi.org/10.1038/s41598-020-62797-z
PRJNA543600 SRR9093167 Illumina MiSeq Glacier Soil Jammu and Kashmir https://doi.org/10.1016/j.ejbt.2020.03.003
PRJNA529966 SRR8830666 Illumina HiSeq 2500 Food-Microbiome Kinema (fermented soyabean) Sikkim https://doi.org/10.3389/fmicb.2019.01744
PRJNA529966 SRR8830667 Illumina HiSeq 2500 Food-Microbiome Kinema (fermented soyabean) Sikkim https://doi.org/10.3389/fmicb.2019.01744
PRJNA529966 SRR8830669 Illumina HiSeq 2500 Food-Microbiome Kinema (fermented soyabean) Sikkim https://doi.org/10.3389/fmicb.2019.01744
PRJNA597963 SRR10822349 Illumina MiSeq Food-Microbiome Xaj-pitha (Rice wine) Assam https://doi.org/10.1007/s13205-020-2059-z
PRJNA439163 SRR6869414 HiSeq X Ten Glacier Ice Sikkim https://doi.org/10.1016/j.ecoenv.2020.111037
PRJNA512265 SRR8381943 Ion Torrent PGM Environmental Water Ladakh http://doi.org/10.22438/jeb/41/4/MRN-1331
PRJNA551930 SRR9618230 Illumina HiSeq 2500 Environmental Water Ladakh http://doi.org/10.22438/jeb/41/4/MRN-1331
PRJNA741363 SRR14921307 MinION Environmental Soil Himachal Pradesh Not yet reported
PRJNA741363 SRR14921308 MinION Environmental Soil Himachal Pradesh Not yet reported
PRJNA513945 SRR8423784 Ion Torrent PGM Environmental Water Ladakh Not yet reported
PRJEB14856 ERR1543536 Illumina HiSeq 3000 Hotspring Microbial Mats Himachal Pradesh Not yet reported
PRJNA761237 SRR17220458 MinION Glacier Soil Himachal Pradesh Not yet reported
PRJNA761237 SRR17220459 MinION Glacier Soil Himachal Pradesh Not yet reported
PRJEB30661 ERR3047202 Illumina HiSeq 2500 Gut-microbiome Fish Himachal Pradesh https://doi.org/10.1186/s12866-020-01911-7
PRJEB30661 ERR3047201 Illumina HiSeq 2500 Gut-microbiome Fish Himachal Pradesh https://doi.org/10.1186/s12866-020-01911-7
PRJNA531203 SRR9108942 Illumina HiSeq 1000 Gut-microbiome Human Ladakh https://doi.org/10.1371/journal.pone.0231197
PRJNA531203 SRR9108963 Illumina HiSeq 1000 Gut-microbiome Human Ladakh https://doi.org/10.1371/journal.pone.0231197
PRJNA531203 SRR9108964 Illumina HiSeq 1000 Gut-microbiome Human Ladakh https://doi.org/10.1371/journal.pone.0231197
PRJNA531203 SRR9108965 Illumina HiSeq 1000 Gut-microbiome Human Ladakh https://doi.org/10.1371/journal.pone.0231197
PRJNA531203 SRR9108966 Illumina HiSeq 1000 Gut-microbiome Human Ladakh https://doi.org/10.1371/journal.pone.0231197
PRJNA531203 SRR9108967 Illumina HiSeq 1000 Gut-microbiome Human Ladakh https://doi.org/10.1371/journal.pone.0231197
PRJNA531203 SRR9108968 Illumina HiSeq 1000 Gut-microbiome Human Ladakh https://doi.org/10.1371/journal.pone.0231197
PRJNA531203 SRR9108969 Illumina HiSeq 1000 Gut-microbiome Human Ladakh https://doi.org/10.1371/journal.pone.0231197
PRJNA531203 SRR9108970 Illumina HiSeq 1000 Gut-microbiome Human Ladakh https://doi.org/10.1371/journal.pone.0231197
PRJNA529966 SRR8830668 Illumina HiSeq 2500 Food-Microbiome Kinema (fermented soyabean) Sikkim https://doi.org/10.3389/fmicb.2019.01744
PRJNA484024 SRR8352206 NextSeq 500 Hotspring Water Himachal Pradesh https://doi.org/10.1128/MRA.01163-18
PRJNA280364 SRR5387534 Illumina MiSeq Hotspring Microbial Mats Meghalaya https://doi.org/10.1016/j.gdata.2015.04.016
PRJNA695113 SRR13573809 MinION Food-Microbiome Kinema (fermented soyabean) Sikkim https://doi.org/10.3389%2Ffmicb.2022.868383

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