Ladakh Dataset

NCBI

Data Filtering

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BIOPROJECT SRR Protocol/ Sequencing Instrument Category Sub Category Hypervariable Region DOI
PRJNA388130 SRR5613218 NextSeq 500 Environmental Soil Shotgun Sequencing https://doi.org/10.1016/j.scitotenv.2020.139074
PRJNA260660 SRR1578058 454 GS FLX Titanium Environmental Soil ITS https://doi.org/10.1007/s00792-020-01191-z
PRJNA260660 SRR1574779 454 GS FLX Titanium Environmental Soil ITS https://doi.org/10.1007/s00792-020-01191-z
PRJEB5191 ERR406965 454 GS FLX Titanium Environmental Soil V1-V3 https://doi.org/10.1007/s00203-015-1121-4
PRJNA280383 SRR1997903 454 GS FLX Titanium Hotspring Soil V1-V3 https://doi.org/10.1007/s12088-017-0656-2
PRJNA296849 SRR5482169 Ion Torrent Proton Hotspring Water V3 https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR5482168 Ion Torrent Proton Hotspring Water V3 https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR5482167 Ion Torrent Proton Hotspring Water V3 https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR5482166 Ion Torrent Proton Hotspring Water V3 https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR5482165 Ion Torrent Proton Hotspring Water V3 https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR5482164 Ion Torrent Proton Hotspring Water V3 https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR5482163 Ion Torrent Proton Hotspring Water V3 https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR5482162 Ion Torrent Proton Hotspring Water V3 https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR5482161 Ion Torrent PGM Hotspring Water V3 https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR5482160 Ion Torrent PGM Hotspring Water V3 https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR5482159 Ion Torrent PGM Hotspring Water V3 https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR5482158 Ion Torrent PGM Hotspring Water V3 https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR5482156 Ion Torrent PGM Hotspring Water V3 https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR5482155 Ion Torrent PGM Hotspring Water V3 https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR5482154 Ion Torrent PGM Hotspring Water V3 https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR5482141 Ion Torrent PGM Hotspring Water V3 https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2904996 Ion Torrent PGM Hotspring Microbial Mats V3 https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2904995 Ion Torrent PGM Hotspring Microbial Mats V3 https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2626428 Ion Torrent PGM Hotspring Microbial Mats Shotgun Sequencing https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2626309 Ion Torrent PGM Hotspring Microbial Mats Shotgun Sequencing https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2626185 Ion Torrent PGM Hotspring Microbial Mats Shotgun Sequencing https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2626164 Ion Torrent PGM Hotspring Microbial Mats Shotgun Sequencing https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2626160 Ion Torrent PGM Hotspring Microbial Mats Shotgun Sequencing https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2626159 Ion Torrent PGM Hotspring Microbial Mats Shotgun Sequencing https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2626157 Ion Torrent PGM Hotspring Microbial Mats Shotgun Sequencing https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2626156 Ion Torrent PGM Hotspring Microbial Mats Shotgun Sequencing https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2626152 Ion Torrent PGM Hotspring Microbial Mats Shotgun Sequencing https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2626012 Ion Torrent PGM Hotspring Microbial Mats Shotgun Sequencing https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2625867 Ion Torrent PGM Hotspring Microbial Mats Shotgun Sequencing https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2625866 Ion Torrent PGM Hotspring Microbial Mats Shotgun Sequencing https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2625865 Ion Torrent PGM Hotspring Microbial Mats Shotgun Sequencing https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2625864 Ion Torrent PGM Hotspring Microbial Mats Shotgun Sequencing https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2625863 Ion Torrent PGM Hotspring Microbial Mats Shotgun Sequencing https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2625862 Ion Torrent PGM Hotspring Microbial Mats Shotgun Sequencing https://doi.org/10.1038/s41598-020-62797-z
PRJNA296849 SRR2625861 Ion Torrent PGM Hotspring Microbial Mats Shotgun Sequencing https://doi.org/10.1038/s41598-020-62797-z
PRJNA496310 SRR8058208 Illumina HiSeq 3000 Environmental Water V3-V4 https://doi.org/10.1007/s00284-020-02244-4
PRJNA496310 SRR8058209 Illumina HiSeq 3000 Environmental Soil V3-V4 https://doi.org/10.1007/s00284-020-02244-4
PRJNA496310 SRR8058210 Illumina HiSeq 3000 Environmental Soil V3-V4 https://doi.org/10.1007/s00284-020-02244-4
PRJNA496310 SRR8058211 Illumina HiSeq 3000 Environmental Microbial Mats V3-V4 https://doi.org/10.1007/s00284-020-02244-4
PRJNA496310 SRR8058212 Illumina HiSeq 3000 Environmental Microbial Mats V3-V4 https://doi.org/10.1007/s00284-020-02244-4
PRJNA496310 SRR8058213 Illumina HiSeq 3000 Environmental Microbial Mats V3-V4 https://doi.org/10.1007/s00284-020-02244-4
PRJNA512265 SRR8381943 Ion Torrent PGM Environmental Water Shotgun Sequencing http://doi.org/10.22438/jeb/41/4/MRN-1331
PRJNA551930 SRR9618230 Illumina HiSeq 2500 Environmental Water Shotgun Sequencing http://doi.org/10.22438/jeb/41/4/MRN-1331
PRJNA513945 SRR8423784 Ion Torrent PGM Environmental Water Shotgun Sequencing Not yet reported
PRJNA486366 SRR7703399 Illumina MiSeq Environmental Soil V3-V4 https://doi.org/10.1128/MRA.01192-18
PRJNA531203 SRR9108942 Illumina HiSeq 1000 Gut-microbiome Human Shotgun Sequencing https://doi.org/10.1371/journal.pone.0231197
PRJNA531203 SRR9108963 Illumina HiSeq 1000 Gut-microbiome Human Shotgun Sequencing https://doi.org/10.1371/journal.pone.0231197
PRJNA531203 SRR9108964 Illumina HiSeq 1000 Gut-microbiome Human Shotgun Sequencing https://doi.org/10.1371/journal.pone.0231197
PRJNA531203 SRR9108965 Illumina HiSeq 1000 Gut-microbiome Human Shotgun Sequencing https://doi.org/10.1371/journal.pone.0231197
PRJNA531203 SRR9108966 Illumina HiSeq 1000 Gut-microbiome Human Shotgun Sequencing https://doi.org/10.1371/journal.pone.0231197
PRJNA531203 SRR9108967 Illumina HiSeq 1000 Gut-microbiome Human Shotgun Sequencing https://doi.org/10.1371/journal.pone.0231197
PRJNA531203 SRR9108968 Illumina HiSeq 1000 Gut-microbiome Human Shotgun Sequencing https://doi.org/10.1371/journal.pone.0231197
PRJNA531203 SRR9108969 Illumina HiSeq 1000 Gut-microbiome Human Shotgun Sequencing https://doi.org/10.1371/journal.pone.0231197
PRJNA531203 SRR9108970 Illumina HiSeq 1000 Gut-microbiome Human Shotgun Sequencing https://doi.org/10.1371/journal.pone.0231197

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