Ruhika Sharma, Vishal Acharya*

Lightweight Vision Transformer with Transfer Learning for Interpretable Alzheimer's Disease Severity Assessment

Kumari, Khushbu, Samaksh Mittal, Kritika Sharma, Sanatsujat Singh, Jyoti Upadhyay, Vishal Acharya, Virender Kadyan, Sudesh Kumar Yadav, and Rohit Joshi

Deep Learning and Machine Learning Modeling Identifies Thidiazuron as a Key Modulator of Somatic Embryogenesis and Shoot Organogenesis in Ferula assa-foetida L.

Nymphaea Arora, Anil Kumar Rana, Damanpreet Singh*, Vishal Acharya*

Differential Roles of Neuro-Inflammatory Regulator, MAPK11 in Cortex and Hippocampus Following Post-Stroke Cognitive Impairments in Rats

Ekjot Kaur, Vishal Acharya*

Computational prediction of Homo sapiens–Candida albicans protein–protein interactions reveal key virulence factors using dual RNA-Seq data analysis

Shweta Thakur, Ashwani Punia, Satyakam, Vishal Acharya, Brijesh Kumar, Amit Prasad, Sudesh Kumar Yadav, Rajiv Kumar

Bringing bioactive peptides into drug discovery: Challenges and opportunities for medicinal plants

Joel Jose-Santh, Firdous Rasool Sheikh, Diksha Kalia, Riya Sood, Ravi Kumar, Vishal Acharya, Rajesh Kumar Singh*

Transcriptional dynamics in source-sink tissues identifies molecular factors regulating the corm development process in Crocus sativus L.

Neeraj Kumar, Vishal Acharya*

Advances in machine intelligence-driven virtual screening approaches for big-data

Aakriti Sharma#, Ekjot Kaur#, Robin Joshi, Pooja Kumari, Abhishek Khatri, Mohit K. Swarankar, Dinesh Kumar, Vishal Acharya*, Gireesh Nadda*

Systematic analyses with genomic and metabolomic insights reveal a new species, Ophiocordyceps indica sp. nov. from treeline area of Indian Western Himalayan region

Abhishek Khatri, Aman Thakur, Ayush Lepcha, Vishal Acharya*, Rakshak Kumar*

IHM-DB: a curated collection of metagenomics data from the Indian Himalayan Region, and automated pipeline for 16S rRNA amplicon-based analysis (AutoQii2)

Ravi Kumar, Vishal Acharya*

Effector protein structures: a tale of evolutionary relationship

Neeraj Kumar, Vishal Acharya*

Machine intelligence-guided selection of optimized inhibitor for human immunodeficiency virus (HIV) from natural products

Ravi Kumar, Vishal Acharya*

Deep learning based protocol to construct an immune-related gene network of host-pathogen interactions in plants

Neeraj Kumar, Vishal Acharya*

Machine intelligence-driven framework for optimized hit selection in virtual screening

Shiv Rattan, Pankaj Kumar, Ekjot Kaur, Archit Sood, Vishal Acharya, Ashish R. Warghat

Comparative transcriptome and tissue-specific expression analysis of genes reveal tissue-cultured plants as an alternative source for phenylethanoids and phenylpropanoids in Rhodiola imbricata (Edgew.)

Ravi Kumar, Abhishek Khatri, Vishal Acharya*

Deep learning uncovers distinct behaviour of rice network to pathogens response

Meetal Sharma, Prince Anand, Yogendra Padwad*, Vivek Dogra*, Vishal Acharya*

DNA damage response proteins synergistically affect the cancer prognosis and resistance

Desh Raj, Vinesh Sharma, Ashwani Upadhyaya, Neeraj Kumar, Robin Joshi, Vishal Acharya, Dinesh Kumar, Vikram Patial

Swertia purpurascens Wall ethanolic extract mitigates hepatic fibrosis and restores hepatic hepcidin levels via inhibition of TGFβ/SMAD/NFκB signaling in rats

Jyoti Devi, Ekjot Kaur, Mohit Kumar Swarankar, Vishal Acharya*, Shashi Bhushan*

De novo transcriptome analysis provides insights into formation of in vitro adventitious root from leaf explants of Arnebia euchroma

Narendra Vijay Tirpude*, Anamika Sharma, Robin Joshi, Monika Kumari, Vishal Acharya*

Vitex negundo Linn. extract alleviates inflammatory aggravation and lung injury by modulating AMPK/PI3K/Akt/p38-NF-κB and TGF-β/Smad/Bcl2/Caspase/LC3 cascade and macrophages activation in murine model of OVA-LPS induced allergic asthma

Pankaj Kumar, Ashrita, Vishal Acharya, Ashish R. Warghat

Comparative transcriptome analysis infers bulb derived in vitro cultures as a promising source for sipeimine biosynthesis in Fritillaria cirrhosa D. Don (Liliaceae, syn. Fritillaria roylei Hook.) - High value Himalayan medicinal herb

Srijana Mukhia#, Abhishek Khatri#, Vishal Acharya*, Rakshak Kumar*

Comparative genomics and molecular adaptational analysis of Arthrobacter from Sikkim Himalaya provided insights into its survivability under multiple high-altitude stress

Supriya Sharma#, Meetal Sharma#, Anil Kumar Rana, Robin Joshi, Mohit Swarnkar, Vishal Acharya*, Damanpreet Singh*

Deciphering key regulators involved in epilepsy-induced cardiac damage through whole transcriptome and proteome analysis in a rat model

Anil Kumar, Srijana Mukhia, Neeraj Kumar, Vishal Acharya, Sanjay Kumar and Rakshak Kumar

A Broad Temperature Active Lipase Purified From a Psychrotrophic Bacterium of Sikkim Himalaya With Potential Application in Detergent Formulation

Rakshak Kumar, Vishal Acharya, Srijana Mukhia, Dharam Singh, Sanjay Kumar

Complete genome sequence of Pseudomonas frederiksbergensis ERDD5:01 revealed genetic bases for survivability at high altitude ecosystem and bioprospection potential

Parul Goel, Nitesh Kumar Sharma, Monika Bhuria, Vishal Sharma, Rohit Chauhan, Shivalika Pathania, Mohit Kumar Swarnkar, Vandna Chawla, Vishal Acharya, Ravi Shankar & Anil Kumar Singh

Transcriptome and Co-Expression Network Analyses Identify Key Genes Regulating Nitrogen Use Efficiency in Brassica juncea L.

Rakshak Kumar#, Vishal Acharya#, Dharam Singh, Sanjay Kumar

Strategies for high-altitude adaptation revealed from high quality draft genome of non-violacein producing Janthinobacterium lividum ERGS5:01

Neeraj Kumar, Vishal Acharya*

Metabolomics Resources: An Introduction of Databases and Their Future Prospective

Preeti Arya & Vishal Acharya*

Plant STAND P-loop NTPases: A current perspective of genome distribution, evolution, and function

Shailender Kumar Verma, Ankita Sharma, Padmani Sandhu, Neha Choudhary, Shailaja Sharma, Vishal Acharya, Yusuf Akhter

Proteome scale identification, classification and structural analysis of iron-binding proteins in bread wheat

Preeti Arya & Vishal Acharya*

Computational identification raises a riddle for distribution of putative NACHT NTPases in the genome of early green plants

Gulshan Kumar#, Preeti Arya#, Khushboo Gupta, Vinay Randhawa, Vishal Acharya, and Anil Kumar Singh

Comparative phylogenetic analysis and transcriptional profiling of MADS-box gene family identified DAM and FLC-like genes in apple (Malus x domestica)

Geetika Sirhindi, Poonam Sharma, Preeti Arya, Parul Goel, Gulshan Kumar, Vishal Acharya, Anil Kumar Singh

Genome-Wide Characterization and Expression Profiling of TIFY Gene Family in Pigeonpea (Cajanus cajan (L.) Millsp.) under Copper Stress

Vinay Randhawa, Anil Kumar Singh & Vishal Acharya*

A systematic approach to prioritize drug targets using machine learning, a molecular descriptor-based classification model, and high-throughput screening of plant derived molecules: a case study in oral cancer

Vinay Randhawa & Vishal Acharya*

Integrated network analysis and logistic regression modeling identify stage-specific genes in Oral Squamous Cell Carcinoma

Shivalika Pathania & Vishal Acharya*

Computational analysis of "-omics" data to identify transcription factors regulating secondary metabolism in Rauvolfia serpentine

Arun Kumar, Vinay Randhawa, Vishal Acharya, Kashmir Singh, Sanjay Kumar

Amino acids flanking the central core of Cu,Zn superoxide dismutase are important in retaining enzyme activity after autoclaving

Preeti Arya, Gulshan Kumar, Vishal Acharya*, Anil Kumar Singh*

Genome-wide identification and expression analysis of NBS-encoding genes in Malus x domestica and expansion of NBS genes family in Rosaceae

Anil Kumar Singh, Vishal Sharma, Awadhesh Kumar Pal, Vishal Acharya and Paramvir Singh Ahuja

Genome-Wide Organization and Expression Profiling of NAC Transcription Factor Family in Potato (Solanum tuberosum L.)

Pradeep Kumar Bhardwaj, Ritu kapoor, Deep Mala, Geetika Bhagwat, Vishal Acharya, Anil Kumar Singh, Surender K Vats, Paramvir S. Ahuja & Sanjay Kumar

Braving the attitude of altitude: Caragana jubata at work in cold desert of Himalaya