| Module 1 | GO:0045449 | regulation of transcription | Transcriptional Regulation | Genes | 
      | Module 3 | GO:0006468 | protein phosphorylation | Signal Transduction | Genes | 
      | Module 5 | GO:0006468 | protein phosphorylation | Signal Transduction | Genes | 
      | Module 7 | GO:0006468 | protein phosphorylation | Signal Transduction | Genes | 
      | Module 21 | GO:0006468 | protein phosphorylation | Signal Transduction | Genes | 
      | Module 27 | GO:0016310 | phosphorylation | Signal Transduction | Genes | 
      | Module 31 | GO:0016071 | mRNA metabolic process | Transcriptional Regulation | Genes | 
      | Module 36 | GO:0010468 | regulation of gene expression | Transcriptional Regulation | Genes | 
      | Module 46 | GO:0008202 | steroid metabolic process | Hormone | Genes | 
      | Module 50 | GO:0022403 | cell cycle phase | Growth and Development | Genes | 
      | Module 54 | GO:0016192 | vesicle-mediated transport | Defense response | Genes | 
      | Module 57 | GO:0007264 | small GTPase mediated signal transduction | Signal Transduction | Genes | 
      | Module 58 | GO:0006468 | protein phosphorylation | Signal Transduction | Genes | 
      | Module 80 | GO:0006468 | protein phosphorylation | Signal Transduction | Genes | 
      | Module 92 | GO:0032502 | developmental process | Growth or Development | Genes | 
      | Module 119 | GO:0006888 | ER to Golgi vesicle-mediated transport | Defense response | Genes | 
      | Module 120 | GO:0006468 | protein phosphorylation | Signal Transduction | Genes | 
      | Module 135 | GO:0006888 | ER to Golgi vesicle-mediated transport | Defense response | Genes | 
      | Module 136 | GO:0006508 | proteolysis | Defense response | Genes | 
      | Module 138 | GO:0006412 | biological_process | Growth and Development | Genes | 
      | Module 142 | GO:0010468 | regulation of gene expression | Transcriptional Regulation | Genes | 
      | Module 143 | GO:0019219 | regulation of nucleobase-containing compound metabolic process | Other | Genes | 
      | Module 172 | GO:0009081 | branched-chain amino acid metabolic process | Defense response | Genes | 
      | Module 174 | GO:0006168 | adenine salvage | Growth and Development | Genes | 
      | Module 196 | GO:0006396 | RNA processing | Transcriptional Regulation | Genes | 
      | Module 200 | GO:0016072 | rRNA processing | Transcriptional Regulation | Genes | 
      | Module 205 | GO:0032312 | regulation of ARF GTPase activity | Signal Transduction | Genes | 
      | Module 212 | GO:0006974 | response to DNA damage stimulus | Defense Response | Genes | 
      | Module 225 | GO:0009127 | purine nucleoside monophosphate biosynthetic process | Growth and Development | Genes | 
      | Module 234 | GO:0045449 | regulation of transcription | Transcriptional Regulation | Genes | 
      | Module 235 | GO:0009725 | response to Hormone stimulus | Hormone | Genes | 
      | Module 238 | GO:0010468 | regulation of gene expression | Transcriptional Regulation | Genes | 
      | Module 251 | GO:0006471 | protein ADP-ribosylation | Defense Response | Genes | 
      | Module 253 | GO:0006366 | transcription from RNA polymerase II promoter | Transcriptional Regulation | Genes | 
      | Module 261 | GO:0016192 | vesicle-mediated transport | Defense Response | Genes | 
      | Module 262 | GO:0006351 | transcription DNA-dependent | Transcriptional Regulation | Genes | 
      | Module 300 | GO:0045449 | regulation of transcription | Transcriptional Regulation | Genes | 
      | Module 301 | GO:0006350 | transcription DNA-dependent | Transcriptional Regulation | Genes | 
      | Module 308 | GO:0031326 | regulation of cellular biosynthetic process | Growth and Development | Genes | 
      | Module 314 | GO:0006350 | transcription DNA-dependent | Transcriptional Regulation | Genes |